FST and Admixture Ananlysis of 2bRAD Subset

I did a quick FST and Admixture analysis of the subset of 20 individuals from each population (19 from SS as one of them had inconsistent genotyping across replicates). You can view the results at this Jupyter Notebook on my github. These are very preliminary and will likely benefit from more individuals and by playing around more with the parameters in the mapping/genotyping. I plan to also look at nucleotide diversity.

 

 

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