PCR of 16S Region
- Verifying species identity as some may have actually been juvenile C. gigas
- BC3_7 redo
- BC3_11 redo
- BC3_12
- BC3_13
- BC3_15
- BC3_16
- BC3_17
- BC3_18
- OR2_3
- OR2_4
- OR2_5
- OR2_6
- OR2_7
- OR2_8
- OR2_9
- OR2_10
- OR2_11
- OR2_12
- OR2_15
- OR2_16
- OR2_17
- OR2_18
- OR2_19
- OR2_20
- OR3_1
- OR3_2
- OR3_3
- OR3_5
- OR3_6
- OR3_9
- OR3_10
- OR3_12
- OR3_13
- OR3_15
- OR3_17
- OR3_18
- WA9_2
- WA9_3
- WA9_4
- WA9_5
- WA9_6
- WA9_7
- WA9_8
- WA9_9
- WA9_10
- WA9_11
Make Master Mix 1
1x 51x
Water 6 ul 306ul
dNTPs .5ul 25.5ul
R primer 2.5 ul 127.5
F primer 2.5ul 127.5
1x 51x
Water 6 ul 306ul
dNTPs .5ul 25.5ul
R primer 2.5 ul 127.5
F primer 2.5ul 127.5
Master Mix 2
1x 51x
Water 9.17ul 467.67
10x buffer 3.2 ul 163.2
Taq .13 6.63
Add 1 ul DNA to eac tube
Run out gels
- CA2_1,3,4,5,7 (6/2)
-
- redo all
- CA3_1,2,3,4,5,6
-
- 5:3
6:3 - redo CA3_1,2,3,4
- 5:3
- WA12D_1,2,3,4,5,6
-
- 1: 0
2: 3
3: 4
4: 3
5: 5
6: 0 - redo WA12D_1,6
- 1: 0
- WA10T_1,2,4,5,6,7
-
- 1: 5
2:4.5
4: 5
5: 0
6: 5
7: 0 - redo WA10T_4,6
- 1: 5
- CA6_1,3,7,8,9 redos
-
- 1: 2 (low, deg)
3: 3(low)
7: 3(low,deg)
8: 5
9: 0
- 1: 2 (low, deg)
- WA9_2,3,7 redos
-
- 2: 2.5(low)
3: 0
7: 1
- 2: 2.5(low)
- OR1_1,2 redos
-
- 1: 5
2: 3.5(low)
- 1: 5
- CA7_6 redos
-
- 6: 3.5(low)
- BC3_12,13,15,16,17,18
-
- 12: 5
13: 4(bright, some smear)
15: 2(low)
16: 5
17: 3.5(smear)
18: 3.5(very very bright, smear)
- 12: 5
- Note: Re-extract CA6_1,9, WA9_3,7, BC4